BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027E04SP1|AL428735
(873 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig820 1631 0.0
>3x_Contig820
Length = 1802
Score = 1631 bits (823), Expect = 0.0
Identities = 852/859 (99%), Gaps = 2/859 (0%)
Strand = Plus / Minus
Query: 16 tcaaacttcttctgaaacttttccattacctgctcaatgttccattcactaggaaattct 75
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 1802 tcaaacttcttctgaaacttttccattacctgctcatt-ttccattcactaggaaattcc 1744
Query: 76 tcgtcgtgtattgtgctttctggtgattttattggtggcagtccttcatacaatggatct 135
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct: 1743 tcgtcgtgtattgtgctttctggtgattttattggtggcagtctttcatacaatggattt 1684
Query: 136 tttttaactttgtccaattggtctggtattttcccatgccttaactgatacacggctatg 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1683 tttttaactttgtccaattggtctggtattttcccatgccttaactgatacacggctatg 1624
Query: 196 atgaaggaacttaccggtacg-tcatctctctcatcttcaaattgatattaatgtcgtta 254
||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||
Sbjct: 1623 atgaaggaacttaccggtacggtcatctctctcatctccaaattgatattaatgtcgtta 1564
Query: 255 agtgggaaaggtctctctaaatccatcatggcatctgacttgaaaattgtgtttgcgacc 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1563 agtgggaaaggtctctctaaatccatcatggcatctgacttgaaaattgtgtttgcgacc 1504
Query: 315 atctgcttctcctttaacatgacactttgaaggttcacttcaaacgcgaactcattgccc 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1503 atctgcttctcctttaacatgacactttgaaggttcacttcaaacgcgaactcattgccc 1444
Query: 375 tcggagaatatctttatcaaggtaaagttgatgaaaatgtcaccaattttaatcccatcg 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1443 tcggagaatatctttatcaaggtaaagttgatgaaaatgtcaccaattttaatcccatcg 1384
Query: 435 attaaaatctttaccctgtcaagccatttggacataaacggtaaatatctcgtcaaagtc 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1383 attaaaatctttaccctgtcaagccatttggacataaacggtaaatatctcgtcaaagtc 1324
Query: 495 ctcgatagtaatttacaagtttcgtccttcaggtcttcttccgatggaccgtgtaactgt 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1323 ctcgatagtaatttacaagtttcgtccttcaggtcttcttccgatggaccgtgtaactgt 1264
Query: 555 tgcgaatcatttgttttatcgtcagtatcgccatctttcgattgaactttacctatccat 614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1263 tgcgaatcatttgttttatcgtcagtatcgccatctttcgattgaactttacctatccat 1204
Query: 615 tccacagtatctataattaattggtgtttaaaagcgtcatacctaatagacttaatccaa 674
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 tccacagtatctataattaattggtgtttaaaagcgtcatacctaatagacttaatccaa 1144
Query: 675 agcttgtctttaattctaattctttgcaactttaatgtgagtgggttaaatcccaacaca 734
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 agcttgtctttaattctaattctttgcaactttaatgtgagtgggttaaatcccaacaca 1084
Query: 735 tatatccccgtgaaaaaatagaggaatgaattgataatcaaccatccaatgacagcaaat 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 tatatccccgtgaaaaaatagaggaatgaattgataatcaaccatccaatgacagcaaat 1024
Query: 795 ttggcgatccaaagtacattattcagtagccatgtacaaacttcgacaataccgaaagtc 854
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 ttggcgatccaaagtacattattcagtagccatgtacaaacttcgacaataccgaaagtc 964
Query: 855 attgcacaatgtcttttaa 873
|||||||||||||||||||
Sbjct: 963 attgcacaatgtcttttaa 945
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7070
Number of Sequences: 1807
Number of extensions: 7070
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)